If you've deleted an app the patch is looking for, maybe this thread helps:
Motoblur Update 219 +Download (Instructions modified for Root users) - xda-developers
Somebody there has a backup of the system files.
Damn! I had just rooted my D4, fiddled endlessly with TB and SetCPU and was looking forward to seeing better battery life. And promptly they come along with this update, which I just installed following the instructions over at the xda forum, and now - if I get better battery performance I won't even know: Is it the update or did rooting the phone make the difference?
Well, whatever it is - I'll be happy if I get a few more hours out of that battery.