So can I just reflash clockworkmod over that then or how do I go about doing that
All you need to do is go into "Recovery Flasher V3"> hit the "run.bat"> instead of selecting 1) for TWRP, select the 2) for ClockWorkMod. I haven't played around with CWM yet, but there is an app in the Playstore called ROM Manager and there is an upgrade as well. I do know that ROM Manager has not updated yet to include our devices, which soon or shortly they will. Anyways installing CWM in the Recovery Flasher is considered a "manual" installation in terms of compatiability with the ROM Manager app. Here is the link for ROM Manager> which will eventually fully-support our devices.