In the readmes, it mentions that the v6 script creates the supercharger.sh in /data and that if you were on a stock ROM, which i was, you had to run 99supercharger.sh at boot so that your memory killer settings would stay.
Sorry to bother you, but I actually tried it again, but this time I didnt make 99supercharger.sh run at boot. The homescreen app was unable to be killed, but I had to run the v6 supercharger script again and choose 9.
The backups I have are in a folder, each backup is it's own folder, and there are some files inside,
.android_secure.img
cache.img
data.img
system.img
nandroid.md5
If i right-click and select open archive with 7-zip, all I see is another file inside, like if I opened data.img, i would see a file named data inside. I tried to extract that file, but it didnt work.
I searched around and I found a program called unyaffs.exe that would let me extract these .img files.
So, yeah I kind of solved my own problems. But thanks for your help anyway.